Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908629.1_cds_XP_016458780.1_52374
CDS Infomation

[gene=LOC107782409] [db_xref=GeneID:107782409] [protein=GATA transcription factor 26-like] [protein_id=XP_016458780.1] [location=complement(join(9468..9778,10602..10722,10832..11018,11118..11221,11528..11600,12139..12571,13061..13429,15190..15229))] [gbkey=CDS]
Sequence

ATGGGAAAGGAAGGACCTTGCTATCACTGTGGTGTTACAAGCACCCCACTCTGGCGTAAT
GGACCTCCGGAAAAGCCAATATTGTGCAACGCATGTGGATCTCGGTGGAGAACAAAAGGG
ACTTTGGCAAACTATACTCCTTTGCATGCAAGGGCAGAACCTTGTGACTTTGAGGAACAC
CGAGTTTCTAGGTTCAAGAACATGTCTTCTACAAAGAACAAAGATGCAAAGGTTCTGAAA
CGAAAGCAAACTCATGATATGGTTGAAGTTGGAACTCCTCCTGATTATAATTTCGGTTTC
AGAAAGTGCTTAGATGAAGATACTAGCAATAGGTCAAGTTCTGGCTCCGTTGTCTCAAAT
TCCGAGAGCTGTGCACAATTTGGTAGTGCTGAAGCAAGTGATTTGACAGGCCCAGCACAA
TCCAATATATGGGATACAACGGTGCCTTCAAAGAAGAGAACCTGTTTCAATCGTCCAAAG
CCATCTTCAGTCGAGAAGCTCACCAAAGACCTATATACCATCTTACATGAACAACAACAA
AGTTCATGCTTCTCTGCATCCTCTGAAGAGGATTTGCTTTTCGAGAGTGAAAAGCCTATG
GTTTCTGTTGAGATAGGACATGGCAGTATGCTAATTCGGCATCCTAGTTCGATAGGCAGA
GAAGAATCATCAGAAGCCAGCTCTCTTTCCGTTGAAAACAAGCACCGTTCTGTCAATGAG
GCTTATTCACGATTGACTACCCCACCTGTAAATATTAGTAGGGGTGTCGATTCACCAAAT
AGTGGGACCGAGAGAACCAAGAAACCTACCGGTCAGGTGGTGGAACAGAACCAGATTAAA
AGAAACAAAGATCACCTTGAAAACCTACAGATTCTTGGACATCATAATTCACCCCTTCGC
TATATAGAACTGAAGGACGTACTTAATTTTGAAGAATTCATGAGGCATTTATCAAGTGAT
GATCAACAACAGCTACTAAAGTACTTACCGCCTGTTGATTCTTTTGCGCCTCCAGATAGT
CTTAGAAGCATGTTTGAGAGCTCTCAATTTGAGGAAAACCTCTCTTCTTTCCAGAAACTT
CTTGCAGAAGGTGTTTTCGATAACTCGTTGCCAGGAGTAAAGTTAGAAGATTGTAGAACC
TTGAAGAGGTTTATATTATGCTATTTATCAAAGTCAAAATGGGTGGAACAATATAATCTA
CTCAAGGACACAAAGTGTAAGAATAGTAGCAGCGGTTCTGAAGTTGCAGGAGAGCGAAGT
GTTATCGGCACATGTCATTCAGTAACTGTGAAGAGACCACAGGAGCGACAACATCTAAAG
TATTCGGGTGCAAAGACAACAATGAAGAGCCCCAAGAGTGTGGTGATGAAAAGCATCTAT
GAGCAGAAGGAACCATTAGACAATGATGGTTCTTGCTCCAGCCCAAAAAGCTCGTTCGCC
TTGCCTTCTGAGACTAGTTCCCTCGTACTGGATTCTTTCCGTTCTGCAAACGAAAATTCT
GATCAGGACTTGCTGCTGAATGTGCCATCCAACAGCTACTTCCCTCAAGCAGAACTACTC
TTACCAACATCAAGTTTTACTCCTCAAGCGAGTACTAGTAGTAGCTCAATGTATCCTTCA
CATCTCGTCCGTCCCTAG

Peptide Sequence

PEP ID

XP_016458780.1
PEP Infomation

PREDICTED: GATA transcription factor 26-like [Nicotiana tabacum]
Sequence

MGKEGPCYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLANYTPLHARAEPCDFEEH
RVSRFKNMSSTKNKDAKVLKRKQTHDMVEVGTPPDYNFGFRKCLDEDTSNRSSSGSVVSN
SESCAQFGSAEASDLTGPAQSNIWDTTVPSKKRTCFNRPKPSSVEKLTKDLYTILHEQQQ
SSCFSASSEEDLLFESEKPMVSVEIGHGSMLIRHPSSIGREESSEASSLSVENKHRSVNE
AYSRLTTPPVNISRGVDSPNSGTERTKKPTGQVVEQNQIKRNKDHLENLQILGHHNSPLR
YIELKDVLNFEEFMRHLSSDDQQQLLKYLPPVDSFAPPDSLRSMFESSQFEENLSSFQKL
LAEGVFDNSLPGVKLEDCRTLKRFILCYLSKSKWVEQYNLLKDTKCKNSSSGSEVAGERS
VIGTCHSVTVKRPQERQHLKYSGAKTTMKSPKSVVMKSIYEQKEPLDNDGSCSSPKSSFA
LPSETSSLVLDSFRSANENSDQDLLLNVPSNSYFPQAELLLPTSSFTPQASTSSSSMYPS
HLVRP

Transcript Sequence

Gene sequence data has not been registered.